Fall Term Schedule
Fall 2026
| Number | Title | Instructor | Time |
|---|
|
BME 1000-01
Mark Buckley
7:00PM - 7:00PM
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|
Teaching assistantship in Biomedical Engineering.
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|
BME 1001-01
Mark Buckley
7:00PM - 7:00PM
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Graduate research assistantship in Biomedical Engineering.
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BME 101-01
Edward Brown
MWF 11:50AM - 12:40PM
|
|
An introductory overview of the multi-disciplinary field of biomedical engineering. Application of elementary engineering principles to the analyses of physiological systems. Course topics include biomechanics, cell and tissue engineering, biosignals, biosystems, bioinstrumentation, medical imaging, medical optics, and bioethics. Includes weekly laboratory and introduction to the use of computers as tools for solving engineering problems.
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|
BME 101-02
Kanika Vats
F 1:00PM - 1:50PM
|
|
An introductory overview of the multi-disciplinary field of biomedical engineering. Application of elementary engineering principles to the analyses of physiological systems. Course topics include biomechanics, cell and tissue engineering, biosignals, biosystems, bioinstrumentation, medical imaging, medical optics, and bioethics. Includes weekly laboratory and introduction to the use of computers as tools for solving engineering problems.
|
|
BME 101-03
Kanika Vats
T 9:40AM - 10:55AM
|
|
An introductory overview of the multi-disciplinary field of biomedical engineering. Application of elementary engineering principles to the analyses of physiological systems. Course topics include biomechanics, cell and tissue engineering, biosignals, biosystems, bioinstrumentation, medical imaging, medical optics, and bioethics. Includes weekly laboratory and introduction to the use of computers as tools for solving engineering problems.
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|
BME 101-05
Kanika Vats
W 2:00PM - 3:15PM
|
|
An introductory overview of the multi-disciplinary field of biomedical engineering. Application of elementary engineering principles to the analyses of physiological systems. Course topics include biomechanics, cell and tissue engineering, biosignals, biosystems, bioinstrumentation, medical imaging, medical optics, and bioethics. Includes weekly laboratory and introduction to the use of computers as tools for solving engineering problems.
|
|
BME 101-06
Kanika Vats
W 3:25PM - 4:40PM
|
|
An introductory overview of the multi-disciplinary field of biomedical engineering. Application of elementary engineering principles to the analyses of physiological systems. Course topics include biomechanics, cell and tissue engineering, biosignals, biosystems, bioinstrumentation, medical imaging, medical optics, and bioethics. Includes weekly laboratory and introduction to the use of computers as tools for solving engineering problems.
|
|
BME 101-08
Kanika Vats
T 12:30PM - 1:45PM
|
|
An introductory overview of the multi-disciplinary field of biomedical engineering. Application of elementary engineering principles to the analyses of physiological systems. Course topics include biomechanics, cell and tissue engineering, biosignals, biosystems, bioinstrumentation, medical imaging, medical optics, and bioethics. Includes weekly laboratory and introduction to the use of computers as tools for solving engineering problems.
|
|
BME 201-01
Mark Buckley
MWF 10:25AM - 11:15AM
|
|
Teaches elementary mechanical equilibrium and motion with extended applications to biology. Lectures present a traditional analysis of idealized particles and rigid bodies. Topics include force and moment balances, frames, trusses and pulleys, systems with friction, mass centers, area moments, and the linear and rotational kinetics and kinematics of rigid bodies. Weekly exercises apply fundamental principles to non-biological problems in two and three dimensions. Weekly problems extend the application to biological problems ranging from human motion to the mechanics of cells. In an end-of-term project students analyze human motion using the MATLAB programming language. This is a required course for BME majors typically taken in the sophomore year. Prerequisites: MATH 161 and 162, BME 101 and PHYS 121.
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|
BME 201-02
Mark Buckley
F 2:00PM - 3:15PM
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|
Teaches elementary mechanical equilibrium and motion with extended applications to biology. Lectures present a traditional analysis of idealized particles and rigid bodies. Topics include force and moment balances, frames, trusses and pulleys, systems with friction, mass centers, area moments, and the linear and rotational kinetics and kinematics of rigid bodies. Weekly exercises apply fundamental principles to non-biological problems in two and three dimensions. Weekly problems extend the application to biological problems ranging from human motion to the mechanics of cells. In an end-of-term project students analyze human motion using the MATLAB programming language. This is a required course for BME majors typically taken in the sophomore year. Prerequisites: MATH 161 and 162, BME 101 and PHYS 121.
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|
BME 211-01
Ian Dickerson
MWF 9:00AM - 9:50AM
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|
Molecular biology, biochemistry, and genetics that are required to understand the biomedical and broader biological Prerequisite: BIOL 110
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|
BME 211-02
Ian Dickerson
F 10:25AM - 11:15AM
|
|
Molecular biology, biochemistry, and genetics that are required to understand the biomedical and broader biological Prerequisite: BIOL 110
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|
BME 222-01
Benjamin Castaneda Aphan
TR 2:00PM - 3:15PM
|
|
The proposed course will explore the unique challenges and opportunities associated with designing medical devices to be used in two types of communities: one in the middle of the jungle in Peru and the other near the Greater Rochester Area. Former officers from the Peruvian Ministry of Health will set the context of healthcare in Peru and its rural areas, whereas experts from URMC will explain about healthcare in Upstate NY and its low-resource settings. During the course, students will work with communities nearby Rochester and in the Peruvian jungle to identify and propose solutions to their needs related to lack of access to health. Furthermore, UR students will collaborate with Peruvian students from “Proyecto de Biodiseño”, a BME course at the Pontificia Universidad Catolica del Peru (PUCP).
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|
BME 228-01
Kevin Davis
TR 12:30PM - 1:45PM
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|
This course introduces students to the theory and practice of control systems engineering. Topics include frequency domain modeling, time domain stability, transient and steady-state error analysis, root locus and frequency response techniques and feedback system design. Emphasis is placed on analyzing physiological control systems, but the concepts and design techniques are applicable and applied to a wide variety of other systems including mechanical and electrical systems. Graduate students will have more homework problems and additional exam problems. Prerequisites: Juniors with MATH164, MATH 165 and BME 230 or ECE 241 (can be concurrent).
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|
BME 228-02
Kevin Davis
M 4:50PM - 6:05PM
|
|
This course introduces students to the theory and practice of control systems engineering. Topics include frequency domain modeling, time domain stability, transient and steady-state error analysis, root locus and frequency response techniques and feedback system design. Emphasis is placed on analyzing physiological control systems, but the concepts and design techniques are applicable and applied to a wide variety of other systems including mechanical and electrical systems. Graduate students will have more homework problems and additional exam problems. Prerequisites: Juniors with MATH164, MATH 165 and BME 230 or ECE 241 (can be concurrent).
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|
BME 229-01
Kanika Vats
TR 11:05AM - 12:20PM
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|
This course will educate students how engineering at the nanoscale is different from macro-level, how/why it offers novel properties which can be harnessed and applied to multiple research fields. Course content will include topics such as, nanoparticles, nanotubes, nanowires- their synthesis, applications, and properties; nanofabrication: both top-down and bottom-up approaches, nano-electronics, nanophotonics, and nano-pumps. Additionally, the workings of many spectroscopic and microscopic techniques specifically developed to analyze and manipulate nanomaterials will be discussed in detail. Prerequisites: Chemistry-I (CHEM 131), Chemistry-II (CHEM132), Physics-I Mechanics (PHYS 121)Biology (BIOL-110), Physics-II Electricity and Magnetism (PHYS 122) or permission of instructor
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|
BME 230-01
Michael Giacomelli
TR 3:25PM - 4:40PM
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|
Introduction to continuous and discrete time signals and linear time invariant systems, with applications to BME including imaging. Topics include convolution, Laplace and Z transforms, stability of systems, the Fourier series and transform, noise and filtering, and fundamental concepts in image processing and enhancement. Weekly homework assignments are supplemented with labs every other week. Two Midterms and a comprehensive final exam. Prerequisites: BME210 or equivalent and MATH 165.
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BME 230-03
Veena Ganeshan
M 10:25AM - 11:40AM
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|
Introduction to continuous and discrete time signals and linear time invariant systems, with applications to BME including imaging. Topics include convolution, Laplace and Z transforms, stability of systems, the Fourier series and transform, noise and filtering, and fundamental concepts in image processing and enhancement. Weekly homework assignments are supplemented with labs every other week. Two Midterms and a comprehensive final exam. Prerequisites: BME210 or equivalent and MATH 165.
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|
BME 230-04
Veena Ganeshan
M 2:00PM - 3:15PM
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|
Introduction to continuous and discrete time signals and linear time invariant systems, with applications to BME including imaging. Topics include convolution, Laplace and Z transforms, stability of systems, the Fourier series and transform, noise and filtering, and fundamental concepts in image processing and enhancement. Weekly homework assignments are supplemented with labs every other week. Two Midterms and a comprehensive final exam. Prerequisites: BME210 or equivalent and MATH 165.
|
|
BME 253-01
Stephen McAleavey
TR 3:25PM - 4:40PM
|
|
This course investigates the imaging techniques applied in state-of-the-art ultrasound imaging and their theoretical bases. Topics include linear acoustic systems, spatial impulse responses, the k-space formulation, methods of acoustic field calculation, dynamic focusing and apodization, scattering, the statistics of acoustic speckle, speckle correlation, compounding techniques, phase aberration correction, velocity estimation, and flow imaging. A strong emphasis is placed on readings of original sources and student assignments and projects based on realistic acoustic simulations. Prerequisites: BME230 or ECE241
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|
BME 255-01
Regine Choe
MW 12:30PM - 1:45PM
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|
This course provides considerations in designing optical instrument suitable for clinical translation, theory behind the light propagation in biological tissues, and data analysis and interpretation skills. In particular, fundamental theory behind the diffuse optical spectroscopy and tomography, diffuse correlation spectroscopy and photoacoustic tomography will be covered. Pre-requisites: BME221, BME270 or permission of instructor
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|
BME 260-01
Scott Seidman
TR 9:40AM - 10:55AM
|
|
A quantitative, model-oriented approach to physiological systems is presented. Topics include muscle and nerve tissue, the cardiovascular system, the respiratory system, the renal system, and a variety of neural systems. Prerequisite: ECE 113 or BME 210 or permission of instructor.
|
|
BME 260-03
Scott Seidman; Kanika Vats
F 10:00AM - 1:00PM
|
|
A quantitative, model-oriented approach to physiological systems is presented. Topics include muscle and nerve tissue, the cardiovascular system, the respiratory system, the renal system, and a variety of neural systems. Prerequisite: ECE 113 or BME 210 or permission of instructor.
|
|
BME 260-04
Scott Seidman; Kanika Vats
W 3:25PM - 6:25PM
|
|
A quantitative, model-oriented approach to physiological systems is presented. Topics include muscle and nerve tissue, the cardiovascular system, the respiratory system, the renal system, and a variety of neural systems. Prerequisite: ECE 113 or BME 210 or permission of instructor.
|
|
BME 260-05
Scott Seidman; Kanika Vats
W 9:00AM - 12:00PM
|
|
A quantitative, model-oriented approach to physiological systems is presented. Topics include muscle and nerve tissue, the cardiovascular system, the respiratory system, the renal system, and a variety of neural systems. Prerequisite: ECE 113 or BME 210 or permission of instructor.
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|
BME 283-01
Rebecca Irwin
TR 11:05AM - 12:20PM
|
|
Application of engineering mechanics to biological tissues and systems, with an emphasis on the musculoskeletal system. Topics include structure/function relationships, finite strains, nonlinearities, experimental methodologies, and the effects of mechanics on biological processes. Experimental techniques and non-linear models for characterizing the complex mechanical response of biosolids will be discussed in detail, and the continuum mechanics approach will be highlighted. Pre-requisites: ME 226, BME 201 or ME 120.
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|
BME 283-02
Rebecca Irwin
R 12:30PM - 1:45PM
|
|
Application of engineering mechanics to biological tissues and systems, with an emphasis on the musculoskeletal system. Topics include structure/function relationships, finite strains, nonlinearities, experimental methodologies, and the effects of mechanics on biological processes. Experimental techniques and non-linear models for characterizing the complex mechanical response of biosolids will be discussed in detail, and the continuum mechanics approach will be highlighted. Pre-requisites: ME 226, BME 201 or ME 120.
|
|
BME 295-01
Scott Seidman; Benjamin Castaneda Aphan
W 2:00PM - 3:15PM
|
|
Introduction to design of medical devices and instruments. Students are introduced to methods and strategies for creative design while considering ethical, economic, regulatory and safety issues. In addition to benchmarking existing devices, students prepare for a design project to be completed in the following semester. 2 Credits Prerequisites: math, science, and engineering courses appropriate for fourth-year students in BME.
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BME 391-01
7:00PM - 7:00PM
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|
This course provides undergraduate students the opportunity to pursue in-depth, independent exploration of a topic not regularly offered in the curriculum, under the supervision of a faculty member in the form of independent study, practicum, internship or research. The objectives and content are determined in consultation between students and full-time members of the teaching faculty. Responsibilities and expectations vary by course and department.
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|
BME 394-01
7:00PM - 7:00PM
|
|
This course provides undergraduate students the opportunity to pursue in-depth, independent exploration of a topic not regularly offered in the curriculum, under the supervision of a faculty member in the form of independent study, practicum, internship or research. The objectives and content are determined in consultation between students and full-time members of the teaching faculty. Responsibilities and expectations vary by course and department.
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|
BME 395-01
7:00PM - 7:00PM
|
|
This course provides undergraduate students the opportunity to pursue in-depth, independent exploration of a topic not regularly offered in the curriculum, under the supervision of a faculty member in the form of independent study, practicum, internship or research. The objectives and content are determined in consultation between students and full-time members of the teaching faculty. Responsibilities and expectations vary by course and department.
|
Fall 2026
| Number | Title | Instructor | Time |
|---|---|
| Monday | |
|
BME 230-03
Veena Ganeshan
|
|
|
Introduction to continuous and discrete time signals and linear time invariant systems, with applications to BME including imaging. Topics include convolution, Laplace and Z transforms, stability of systems, the Fourier series and transform, noise and filtering, and fundamental concepts in image processing and enhancement. Weekly homework assignments are supplemented with labs every other week. Two Midterms and a comprehensive final exam. |
|
|
BME 230-04
Veena Ganeshan
|
|
|
Introduction to continuous and discrete time signals and linear time invariant systems, with applications to BME including imaging. Topics include convolution, Laplace and Z transforms, stability of systems, the Fourier series and transform, noise and filtering, and fundamental concepts in image processing and enhancement. Weekly homework assignments are supplemented with labs every other week. Two Midterms and a comprehensive final exam. |
|
|
BME 228-02
Kevin Davis
|
|
|
This course introduces students to the theory and practice of control systems engineering. Topics include frequency domain modeling, time domain stability, transient and steady-state error analysis, root locus and frequency response techniques and feedback system design. Emphasis is placed on analyzing physiological control systems, but the concepts and design techniques are applicable and applied to a wide variety of other systems including mechanical and electrical systems. Graduate students will have more homework problems and additional exam problems. |
|
| Monday and Wednesday | |
|
BME 255-01
Regine Choe
|
|
|
This course provides considerations in designing optical instrument suitable for clinical translation, theory behind the light propagation in biological tissues, and data analysis and interpretation skills. In particular, fundamental theory behind the diffuse optical spectroscopy and tomography, diffuse correlation spectroscopy and photoacoustic tomography will be covered. |
|
| Monday, Wednesday, and Friday | |
|
BME 211-01
Ian Dickerson
|
|
|
Molecular biology, biochemistry, and genetics that are required to understand the biomedical and broader biological |
|
|
BME 201-01
Mark Buckley
|
|
|
Teaches elementary mechanical equilibrium and motion with extended applications to biology. Lectures present a traditional analysis of idealized particles and rigid bodies. Topics include force and moment balances, frames, trusses and pulleys, systems with friction, mass centers, area moments, and the linear and rotational kinetics and kinematics of rigid bodies. Weekly exercises apply fundamental principles to non-biological problems in two and three dimensions. Weekly problems extend the application to biological problems ranging from human motion to the mechanics of cells. In an end-of-term project students analyze human motion using the MATLAB programming language. |
|
|
BME 101-01
Edward Brown
|
|
|
An introductory overview of the multi-disciplinary field of biomedical engineering. Application of elementary engineering principles to the analyses of physiological systems. Course topics include biomechanics, cell and tissue engineering, biosignals, biosystems, bioinstrumentation, medical imaging, medical optics, and bioethics. Includes weekly laboratory and introduction to the use of computers as tools for solving engineering problems. |
|
| Tuesday | |
|
BME 101-03
Kanika Vats
|
|
|
An introductory overview of the multi-disciplinary field of biomedical engineering. Application of elementary engineering principles to the analyses of physiological systems. Course topics include biomechanics, cell and tissue engineering, biosignals, biosystems, bioinstrumentation, medical imaging, medical optics, and bioethics. Includes weekly laboratory and introduction to the use of computers as tools for solving engineering problems. |
|
|
BME 101-08
Kanika Vats
|
|
|
An introductory overview of the multi-disciplinary field of biomedical engineering. Application of elementary engineering principles to the analyses of physiological systems. Course topics include biomechanics, cell and tissue engineering, biosignals, biosystems, bioinstrumentation, medical imaging, medical optics, and bioethics. Includes weekly laboratory and introduction to the use of computers as tools for solving engineering problems. |
|
| Tuesday and Thursday | |
|
BME 260-01
Scott Seidman
|
|
|
A quantitative, model-oriented approach to physiological systems is presented. Topics include muscle and nerve tissue, the cardiovascular system, the respiratory system, the renal system, and a variety of neural systems. |
|
|
BME 229-01
Kanika Vats
|
|
|
This course will educate students how engineering at the nanoscale is different from macro-level, how/why it offers novel properties which can be harnessed and applied to multiple research fields. Course content will include topics such as, nanoparticles, nanotubes, nanowires- their synthesis, applications, and properties; nanofabrication: both top-down and bottom-up approaches, nano-electronics, nanophotonics, and nano-pumps. Additionally, the workings of many spectroscopic and microscopic techniques specifically developed to analyze and manipulate nanomaterials will be discussed in detail. |
|
|
BME 283-01
Rebecca Irwin
|
|
|
Application of engineering mechanics to biological tissues and systems, with an emphasis on the musculoskeletal system. Topics include structure/function relationships, finite strains, nonlinearities, experimental methodologies, and the effects of mechanics on biological processes. Experimental techniques and non-linear models for characterizing the complex mechanical response of biosolids will be discussed in detail, and the continuum mechanics approach will be highlighted. |
|
|
BME 228-01
Kevin Davis
|
|
|
This course introduces students to the theory and practice of control systems engineering. Topics include frequency domain modeling, time domain stability, transient and steady-state error analysis, root locus and frequency response techniques and feedback system design. Emphasis is placed on analyzing physiological control systems, but the concepts and design techniques are applicable and applied to a wide variety of other systems including mechanical and electrical systems. Graduate students will have more homework problems and additional exam problems. |
|
|
BME 222-01
Benjamin Castaneda Aphan
|
|
|
The proposed course will explore the unique challenges and opportunities associated with designing medical devices to be used in two types of communities: one in the middle of the jungle in Peru and the other near the Greater Rochester Area. Former officers from the Peruvian Ministry of Health will set the context of healthcare in Peru and its rural areas, whereas experts from URMC will explain about healthcare in Upstate NY and its low-resource settings. During the course, students will work with communities nearby Rochester and in the Peruvian jungle to identify and propose solutions to their needs related to lack of access to health. Furthermore, UR students will collaborate with Peruvian students from “Proyecto de Biodiseño”, a BME course at the Pontificia Universidad Catolica del Peru (PUCP). |
|
|
BME 230-01
Michael Giacomelli
|
|
|
Introduction to continuous and discrete time signals and linear time invariant systems, with applications to BME including imaging. Topics include convolution, Laplace and Z transforms, stability of systems, the Fourier series and transform, noise and filtering, and fundamental concepts in image processing and enhancement. Weekly homework assignments are supplemented with labs every other week. Two Midterms and a comprehensive final exam. |
|
|
BME 253-01
Stephen McAleavey
|
|
|
This course investigates the imaging techniques applied in state-of-the-art ultrasound imaging and their theoretical bases. Topics include linear acoustic systems, spatial impulse responses, the k-space formulation, methods of acoustic field calculation, dynamic focusing and apodization, scattering, the statistics of acoustic speckle, speckle correlation, compounding techniques, phase aberration correction, velocity estimation, and flow imaging. A strong emphasis is placed on readings of original sources and student assignments and projects based on realistic acoustic simulations. |
|
| Wednesday | |
|
BME 260-05
Scott Seidman; Kanika Vats
|
|
|
A quantitative, model-oriented approach to physiological systems is presented. Topics include muscle and nerve tissue, the cardiovascular system, the respiratory system, the renal system, and a variety of neural systems. |
|
|
BME 101-05
Kanika Vats
|
|
|
An introductory overview of the multi-disciplinary field of biomedical engineering. Application of elementary engineering principles to the analyses of physiological systems. Course topics include biomechanics, cell and tissue engineering, biosignals, biosystems, bioinstrumentation, medical imaging, medical optics, and bioethics. Includes weekly laboratory and introduction to the use of computers as tools for solving engineering problems. |
|
|
BME 295-01
Scott Seidman; Benjamin Castaneda Aphan
|
|
|
Introduction to design of medical devices and instruments. Students are introduced to methods and strategies for creative design while considering ethical, economic, regulatory and safety issues. In addition to benchmarking existing devices, students prepare for a design project to be completed in the following semester. |
|
|
BME 101-06
Kanika Vats
|
|
|
An introductory overview of the multi-disciplinary field of biomedical engineering. Application of elementary engineering principles to the analyses of physiological systems. Course topics include biomechanics, cell and tissue engineering, biosignals, biosystems, bioinstrumentation, medical imaging, medical optics, and bioethics. Includes weekly laboratory and introduction to the use of computers as tools for solving engineering problems. |
|
|
BME 260-04
Scott Seidman; Kanika Vats
|
|
|
A quantitative, model-oriented approach to physiological systems is presented. Topics include muscle and nerve tissue, the cardiovascular system, the respiratory system, the renal system, and a variety of neural systems. |
|
| Thursday | |
|
BME 283-02
Rebecca Irwin
|
|
|
Application of engineering mechanics to biological tissues and systems, with an emphasis on the musculoskeletal system. Topics include structure/function relationships, finite strains, nonlinearities, experimental methodologies, and the effects of mechanics on biological processes. Experimental techniques and non-linear models for characterizing the complex mechanical response of biosolids will be discussed in detail, and the continuum mechanics approach will be highlighted. |
|
| Friday | |
|
BME 260-03
Scott Seidman; Kanika Vats
|
|
|
A quantitative, model-oriented approach to physiological systems is presented. Topics include muscle and nerve tissue, the cardiovascular system, the respiratory system, the renal system, and a variety of neural systems. |
|
|
BME 211-02
Ian Dickerson
|
|
|
Molecular biology, biochemistry, and genetics that are required to understand the biomedical and broader biological |
|
|
BME 101-02
Kanika Vats
|
|
|
An introductory overview of the multi-disciplinary field of biomedical engineering. Application of elementary engineering principles to the analyses of physiological systems. Course topics include biomechanics, cell and tissue engineering, biosignals, biosystems, bioinstrumentation, medical imaging, medical optics, and bioethics. Includes weekly laboratory and introduction to the use of computers as tools for solving engineering problems. |
|
|
BME 201-02
Mark Buckley
|
|
|
Teaches elementary mechanical equilibrium and motion with extended applications to biology. Lectures present a traditional analysis of idealized particles and rigid bodies. Topics include force and moment balances, frames, trusses and pulleys, systems with friction, mass centers, area moments, and the linear and rotational kinetics and kinematics of rigid bodies. Weekly exercises apply fundamental principles to non-biological problems in two and three dimensions. Weekly problems extend the application to biological problems ranging from human motion to the mechanics of cells. In an end-of-term project students analyze human motion using the MATLAB programming language. |
|